Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs3772696 | chr3:100017460 | C/A | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs3772701 | chr3:99980281 | T/C | 2.01E-5 | 214 | 16.45 | 18.47 | 4.67 | KM Plot |
| KIRP | rs3774006 | chr3:190115678 | C/T | 9.66E-5 | 214 | 12.1 | 19.83 | 13.77 | KM Plot |
| KIRP | rs3779412 | chr7:73625128 | T/C | 0.000196 | 205 | 18.02 | 11.48 | 12.1 | KM Plot |
| KIRP | rs3781216 | chr10:75522404 | G/A | 0 | 211 | 16.45 | 14.83 | 2.47 | KM Plot |
| KIRP | rs3791173 | chr17:80739038 | C/A | 9.94E-5 | 208 | 15.88 | 17.6 | 15.15 | KM Plot |
| KIRP | rs3794172 | chr11:34929056 | T/C | 3.36E-12 | 212 | 16.45 | 17 | 5.57 | KM Plot |
| KIRP | rs3806616 | chr3:99978982 | C/G | 2.01E-5 | 214 | 16.45 | 18.47 | 4.67 | KM Plot |
| KIRP | rs3806971 | chr6:110798045 | G/C | 2.16E-6 | 208 | 7.85 | 13.3 | 18 | KM Plot |
| KIRP | rs3812634 | chr10:75594486 | C/T | 0 | 213 | 16.53 | 17.23 | 4.82 | KM Plot |
| KIRP | rs3812635 | chr10:75594302 | T/G | 0 | 213 | 16.53 | 17.23 | 4.82 | KM Plot |
| KIRP | rs3814014 | chr1:95284631 | C/T | 0.000379 | 214 | 12.98 | 14.47 | 16.45 | KM Plot |
| KIRP | rs381674 | chr1:235667236 | C/A | 0.000643 | 205 | 19.53 | 16.7 | 13.13 | KM Plot |
| KIRP | rs3822967 | chr6:36789526 | C/T | 6.91E-7 | 212 | 17.02 | 14.87 | 8.73 | KM Plot |
| KIRP | rs3834006 | chr1:119909611 | AAT/A | 0 | 214 | 17.02 | 12.58 | 2.62 | KM Plot |